HIVsirDB: A database of HIV inhibiting siRNAs

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HIVsir ID	HIV Strain	NCBI Accession	Target Gene	Position of siRNA target	Sense Sequence of siRNA	Efficacy (%)	GC Content (%)	Cell line	PubMed
1049	HIV-1 (NL4-3)	AF324493	Pol	N/A	GCTCTATTAGATACAGGAGCA	36.00	35	293 T	15336659
1239	HIV-1 (NL4-3)	AF324493	LTR	689	ACGCAGGACUCGGCUUGCUGA	36.20	50	Hela	17996047
1064	HIV-1 (IIIB)	EU541617	Nef	N/A	GCGUCGACGCCAGCAGCAGAUGGGGUG	36.50	59	MT-4 T/Jurkat T	15601474
1079	HIV-1 (NL4-3)	AF324493	Pol	2588	AAGCCAGGAAUGGAUGGCCCA	37.00	46	293 T	15750613
1150	HIV-1 (LAI)	K02013	Pol	4362	AUUUUAAAAGAAAAGGGGG	37.00	25	293 T	16959541
1534	HIV-1 (LAI)	K02013	Pol	4122	UAGCAGGAAGAUGGCCAGU	37.00	42	293 T	20188764
1019	HIV-1 (NL4-3)	AF324493	Tat/Rev	2961	GAGACACCAGGGAUUAGAU	37.00	38	jurkat	12438622
1392	HIV-1 (NL4-3)	AF324493	Rev	N/A	ACUUACUCUUGAUUGUAAC	38.00	25	Hela	18510865
1090	HIV-1 (NL4-3)	AF324493	LTR	9261	AAGGAGAGAACACCAGCUUGU	38.00	38	293 T	15750613
1187	HIV-1 (LAI)	K02013	Tat/Rev	5548	CCUAUGGCAGGAAGAAGCG	38.00	46	293 T	16959541
1626	Hiv-1 Ptar-gl2(vctr)	K02013	LTR	N/A	GGGAGCUCUCUGGCUAACUAG	38.00	46	Hela S3	14762201
1051	HIV-1 (NL4-3)	AF324493	Rev	N/A	GCCTGTGCCTCTTCAGCTACC	38.00	50	293 T	15336659
1624	Hiv-1 Ptar-gl2(vctr)	K02013	LTR	N/A	CUUAAGCCUCAAUAAAGCUUG	38.00	31	Hela S3	14762201
1045	HIV-1 (NL4-3)	AF324493	Env	N/A	GGAGGAGGCGATATGAGGGAC	40.00	50	293 T	15336659
1168	HIV-1 (LAI)	K02013	Pol	4472	CAAAAUUUUCGGGUUUAUU	40.00	21	293 T	16959541
1414	HIV-1 (LAI)	K02013	Pol	4393	CAGUGCAGGGGAAAGAAUA	40.00	38	293 T	19384894